IPM Construction and ReportingFunctions for initializing an IPM, constructing sub-kernels, defining numerical integration, defining initial conditions, defining the environmental state, handling eviction, and generating automated reports describing the IPM. |
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Initialize an IPM |
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Helpers for IPM construction |
Functions to initialize and define IPM kernels |
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Eviction correction |
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Predict methods in ipmr |
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Generate an RMarkdown file with IPM metadata |
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Methods to implement an IPM |
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Projection DiagnosticsEvaluate the behavior of the population projection. |
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Check for model convergence to asymptotic dynamics |
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Access parts of a proto_ipm and IPM objectsExtract and set various pieces of information from |
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Accessor functions for (proto_)ipm objects |
Extract threshold based population size information |
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Further AnalysesFunctions to for analysis of asymptotic dynamics, and helpers to extract information needed for analysis of stochastic dynamcis. |
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Compute the per-capita growth rate for an IPM object |
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Compute the standardized left and right eigenvectors via iteration |
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Create iteration kernels from an IPM object |
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Mean kernels for stochastic models |
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Raise a matrix to a power |
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Right/left multiplication |
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Convert to bare matrices |
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Printing and PlottingFunctions to print and plot |
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Convert ipmr matrix to long data frame |
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Print proto_ipms or *_ipm objects |
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Plot a matrix or an *_ipm object |
Exported DataPre-built |
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Simple deterministic IPM example |
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A general deterministic IPM example |
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Raw demographic data to construct an example IPM |
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